PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.7G306300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 337aa    MW: 36134 Da    PI: 6.9295
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.7G306300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-10166224563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+     l++e+
  Sevir.7G306300.1.p 166 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTTGLTAEN 224
                         9********************************************99998877777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15162226IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978164227IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.6E-11166220No hitNo description
PfamPF001706.0E-9166220IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.96E-11166218No hitNo description
CDDcd147031.55E-23167216No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MDPRFPLPAA PAPSSGGGGA APRGHHRRAH SESFLRFSDA DLLLDPDGDF SFSDLDFPSL  60
SDDSPAASDP TPPPPPPQAA PAPAPRPPGG SHTRSLSLDA AFFEGLALQG AGSSGGGGAG  120
HKRSGSMDGA SSPFEGESAL STGLPDYAKK AMPAERIAEL ALIDPKRAKR ILANRQSAAR  180
SKERKIKYTS ELERKVQTLQ TEATTLSAQL TLLQRDTTGL TAENRELKLR LQSMEEQAKL  240
RDALNEALRE EVQRLKISAG QAVNMNGNIF NGGVQQQMPS YFMQQQQQLQ QQQQQQMSYF  300
GGHQAQHHNQ NHHHQSPSNG GQSLSGQSLN DSMDFI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0394040.0BT039404.1 Zea mays full-length cDNA clone ZM_BFc0012D19 mRNA, complete cds.
GenBankKJ7285210.0KJ728521.1 Zea mays clone pUT6826 bZIP transcription factor (bZIP10) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977320.10.0PREDICTED: transcription factor VIP1-like
SwissprotQ9MA757e-73VIP1_ARATH; Transcription factor VIP1
TrEMBLK3Y8K70.0K3Y8K7_SETIT; Uncharacterized protein
STRINGSi010549m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.17e-47VIRE2-interacting protein 1